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Publications

Independent @ Whitman College

Bent, J. S.; Clark, Z. T.; Collins, J. A., "Quantitative 1H-NMR analysis reveals steric and electronic effects on the substrate specificity of benzoate dioxygenase in Ralstonia eutropha B9."  J. Ind. Microbiol. Biotechnol. 2022 (in press). Link
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Collins, J.; Gerry, C.*; Duncan, M*, “A Chemoenzymatic formal synthesis of epoxyquinols A and B.” Synlett 2019, 30, 2193. Link
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Previous

​Ma, D.; Pignanelli, C.; Tarade, D.; Gilbert, T.; Noel, M.; Mansour, F.; Adams, S.; Dowhayko, A.; Stokes, K.; Vshyvenko, S.; Collins, J.; Hudlicky, T.; McNulty, J.; Pandey, S., “Cancer Cell Mitochondria Targeting by Pancratistatin Analogs is Dependent on Functional Complex II and III.” Scientific Reports 2017, 7, 42957. Link 
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Collins, J.; Brandenbusch, C.; Sadowski, G.; Schmid, A.; Bühler, B. “The Dynamic Influence of Cells on the Formation of Stable Emulsions in Organic-Aqueous Biotransformations” Journal of Industrial Microbiology & Biotechnology 2015, 42, 1011. Link

Brandenbusch, C.; Glonke, S.; Collins, J.; Hoffrogge, R.; Grunwald, K.; Bühler, B.; Schmid A.; Sadowski, G. "Process boundaries of irreversible scCO2-assisted phase separation in biphasic whole-cell biocatalysis." Biotechnology and Bioengineering 2015, 112, ​11, 2316. Link

Ütkür, F. Ö.; Tran, T.-T.; Collins, J.; Brandenbusch, C.; Sadowski, G.; Schmid, A.; Bühler, B. “Integrating organic-aqueous biocatalysis and product recovery using quinaldine 4-oxidase in living P. putida KT2440 (pKP1).” Journal of Industrial Microbiology & Biotechnology 2012, 39, 7, 1049. Link

Ma, D.; Collins, J.; Hudlicky, T.; Pandey, S., “Enhancement of apoptotic and autophagic induction by a novel synthetic C-1 analogue of 7-deoxypancratistatin in human breast adenocarcinoma and neuroblastoma cells with tamoxifen.” Journal of Visualized Experiments 2012, 63, 3586. Link

Ma, D.; Kevineet T.; Mahngar, K.; Akbari-Asl, P.; Collins, J.; Hudlicky, T.; McNulty, J.; Pandey, S.“A novel synthetic C-1 analogue of 7-deoxypancratistatin induces apoptosis in p53 positive and negative human colorectal cancer cells by targeting the mitochondria: enhancement of activity by tamoxifen.” Investigational New Drugs 2011, 30, 1012. Link

Adams, D.; Aichinger, C.; Collins, J.; Rinner, U.; Hudlicky, T. “Chemoenzymatic Synthesis of Idesolide from Benzoic Acid.”  Synlett 2011, 5, 725. Link

Ma, D.; Tremblay, P.; Mahngar, K.; Collins, J.; Hudlicky, T.; Pandey, S., "Selective cytotoxicity against human osteosarcoma cells by a novel synthetic C-1 analogue of 7-deoxypancratistatin is potentiated by curcumin." PLoS One 2011, 6, e28780. Link

Ma, D.; Tremblay, P.; Mahngar, K.; Akbari-Asl, P.; Collins, J.; Hudlicky, T.; Pandey, S., “Induction of apoptosis and autophagy in human pancreatic cancer cells by a novel synthetic C-1 analogue of 7-deoxypancratistatin.” American Journal of  Biomedical Scence 2011, 3, 278. Link

Collins, J.; Rinner, U.; Moser, M.; Hudlicky, T. “Chemoenzymatic Synthesis of Amaryllidaceae Constituents and Biological Evaluation of their C-1 Analogues. The Next Generation Synthesis of 7-Deoxypancratistatin and trans-Dihydrolycoricidine.” Journal of Organic Chemistry 2010, 76, 9, 3069. Link


Fabris, F.; Collins, J.; Sullivan B.; Leisch, H.; Hudlicky T. “Investigation of Steric and Functionality Limits in the Enzymatic Dihydroxylation of Benzoate Esters.  Versatile Intermediates for the synthesis of pseudo-sugars and bicyclic ring systems.” Organic and Bimolecular Chemistry 2009, 7, 2619. Link

Collins, J.; Drouin, M.; Sun, X.; Rinner, U.; Hudlicky, T. “Synthesis of 7-     Deoxypancratistatin-1-carboxaldehyde and Carboxylic Acid via Solvent-Free Intramolecular Aziridine Opening: Phenanthrene to Phenanthridone Cyclization Strategy.” Organic. Letters. 2008, 10, 361. Link

Finn, K. J.; Collins, J.; Hudlicky, T. “Toluene dioxygenase-mediated oxidation of dibromobenzenes. Absolute stereochemistry of new metabolites and synthesis of (L)-conduritol E.” Tetrahedron 2006, 62, 7471. Link

Patents

Sadowsky, G.; Brandenbusch, C.; Collins, J.; Bühler, B. “Verfahren zur Aufarbeitung von stabilen Emulsionen aus Ganzzell-Biotransformationen mittels Phaseninversion” (Applied catastrophic phase inversion)
European Patent: Applicaiton number EP 13005234.3 Filed November 6, 2013

Collins, J.; Hudlicky T. “Novel C-1 analogs of pancratistatin and 7-deoxypancratistatin and processes for their preparation.” 
US: 2011/0306629 A1, Published Dec. 15, 2011
Canada: CA 2747565, PCT Filed Dec 17, 2009

Book chapters

Ütkür F. Ö., Collins J., Brandenbusch C., Sadowski G., Schmid A. and Bühler B. Regioselective Aromatic Hydroxylation of Quinaldine Using Living Pseudomonas putida Cells Containing Quinaldine 4-oxidase. In Practical Methods in Biocatalysis and Biotransformations 2; Whitthal, J.; Sutton, P., Ed.; John Wiley & Sons Ltd, Chichester, UK, 2012; pp. 153-157 
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